{"datasetId":"6e340c4d1e333c7a676b1710d2e3953c","name":"1000 Genomes phase3:GRCh38","id":"1","metadata":[{"type":"Integer","key":"INFO","description":"Confidence interval around END for imprecise variants","number":"2","info":{},"id":"CIEND"},{"number":"2","id":"CIPOS","info":{},"type":"Integer","key":"INFO","description":"Confidence interval around POS for imprecise variants"},{"key":"INFO","description":"Source call set.","type":"String","number":"1","id":"CS","info":{}},{"number":"1","info":{},"id":"END","key":"INFO","description":"End coordinate of this variant","type":"Integer"},{"info":{},"id":"IMPRECISE","number":"0","description":"Imprecise structural variation","key":"INFO","type":"Flag"},{"type":"String","key":"INFO","description":"Merged calls.","number":".","info":{},"id":"MC"},{"type":"String","key":"INFO","description":"Mobile element info of the form NAME,START,ENDPOLARITY; If there is only 5' OR 3' support for this call, will be NULL NULL for START and END","number":"4","info":{},"id":"MEINFO"},{"info":{},"id":"MEND","number":"1","type":"Integer","description":"Mitochondrial end coordinate of inserted sequence","key":"INFO"},{"type":"Integer","description":"Estimated length of mitochondrial insert","key":"INFO","info":{},"id":"MLEN","number":"1"},{"number":"1","info":{},"id":"MSTART","type":"Integer","key":"INFO","description":"Mitochondrial start coordinate of inserted sequence"},{"type":"Integer","key":"INFO","description":"Difference in length between REF and ALT alleles","number":".","id":"SVLEN","info":{}},{"description":"Type of structural variant","key":"INFO","type":"String","info":{},"id":"SVTYPE","number":"1"},{"info":{},"id":"TSD","number":"1","description":"Precise Target Site Duplication for bases, if unknown, value will be NULL","key":"INFO","type":"String"},{"info":{},"id":"AC","number":"A","type":"Integer","description":"Total number of alternate alleles in called genotypes","key":"INFO"},{"number":"A","info":{},"id":"AF","key":"INFO","description":"Estimated allele frequency in the range (0,1)","type":"Float"},{"id":"NS","info":{},"number":"1","type":"Integer","description":"Number of samples with data","key":"INFO"},{"info":{},"id":"AN","number":"1","type":"Integer","description":"Total number of alleles in called genotypes","key":"INFO"},{"number":"A","info":{},"id":"EAS_AF","type":"Float","key":"INFO","description":"Allele frequency in the EAS populations calculated from AC and AN, in the range (0,1)"},{"key":"INFO","description":"Allele frequency in the EUR populations calculated from AC and AN, in the range (0,1)","type":"Float","number":"A","id":"EUR_AF","info":{}},{"info":{},"id":"AFR_AF","number":"A","description":"Allele frequency in the AFR populations calculated from AC and AN, in the range (0,1)","key":"INFO","type":"Float"},{"description":"Allele frequency in the AMR populations calculated from AC and AN, in the range (0,1)","key":"INFO","type":"Float","id":"AMR_AF","info":{},"number":"A"},{"id":"SAS_AF","info":{},"number":"A","description":"Allele frequency in the SAS populations calculated from AC and AN, in the range (0,1)","key":"INFO","type":"Float"},{"description":"Total read depth","key":"INFO","type":"Integer","info":{},"id":"DP","number":"1"},{"id":"ssID","info":{},"number":"A","description":"dbSNP ssID of the allele","key":"INFO","type":"String"},{"number":"0","info":{},"id":"TRANSFORM_TO_DIFFERENT_POS","key":"INFO","description":"The transformationm for dbSNP results in different POS for the alleles on this line","type":"Flag"},{"type":"Flag","key":"INFO","description":"Is Assembly specific. This is set if the variant only maps to one assembly (dbSNP flag)","number":"0","id":"ASP","info":{}},{"number":"1","id":"WGT","info":{},"type":"Integer","key":"INFO","description":"Weight, 00 - unmapped, 1 - weight 1, 2 - weight 2, 3 - weight 3 or more (dbSNP flag)"},{"description":"RS orientation is reversed (dbSNP flag)","key":"INFO","type":"Flag","id":"RV","info":{},"number":"0"},{"description":"rsID to which the remapping of INFO flag WGT relates","key":"INFO","type":"String","info":{},"id":"WGT_ref_RS","number":"1"},{"number":"0","info":{},"id":"ERR_REF","key":"INFO","description":"The REF cannot be resolved between builds","type":"Flag"},{"description":"The REF matched the - strand in GRCh38","key":"INFO","type":"Flag","id":"MATCHED_REV","info":{},"number":"0"},{"description":"The REF matched the + strand in GRCh38","key":"INFO","type":"Flag","info":{},"id":"MATCHED_FWD","number":"0"},{"type":"Flag","description":"The REF and ALT have switched between GRCh37 and GRCh38","key":"INFO","id":"SWITCHED_REF","info":{},"number":"0"},{"id":"REF_SWITCHED_TO_NON_PHASE3_ALT","info":{},"number":"0","description":"The REF has changed to a non-PHASE3 ALT","key":"INFO","type":"Flag"},{"number":"0","info":{},"id":"ALLELES_DIFFERENT_POS","key":"INFO","description":"dbSNP has different POS for ALTS on the same line","type":"Flag"},{"key":"INFO","description":"An ID has been missed in remapping","type":"Flag","number":"0","id":"MISSED_ID","info":{}},{"type":"Flag","key":"INFO","description":"An ALT has been missed in remapping","number":"0","id":"MISSED_ALT","info":{}},{"key":"INFO","description":"The rs cannot be used to remap","type":"Flag","number":"0","id":"NO_RS_TO_MAP_TO","info":{}},{"number":"1","id":"GT","info":{},"key":"FORMAT","description":"Genotype","type":"String"}],"referenceSetId":"GRCh38"}